Miyakogusa Predicted Gene

Lj4g3v1388320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JLF1_MEDTR 716 68.6 77.7 (tr|G7JLF1) Chromatin remodeling complex subunit OS=Medicago truncatula GN=MTR_4g103600 PE=4 SV=1
TAIR_pep AT5G14170.1 565 59.5 77.3 | Symbols: CHC1 | SWIB/MDM2 domain superfamily protein | chr5:4568696-4570444 REVERSE LENGTH=534
Medicago Medtr4g103600.1 716 68.6 77.7 | chromatin remodeling complex subunit | HC | chr4:42821855-42817823 | 20130731
Soybean Glyma05g03290.1 710 65.3 75.1  
LJGI gnl|LJGI|TC82114 823 100.0 100.0 similar to UniRef100_A7PHG4 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1388320.1 length: 538 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02201 SWIB 6.9e-17 322-394
superfamily SSF47592 SWIB/MDM2 6.3e-24 313-405
IPR019835 SWIB domain
HMMSmart SM00151 SWI 2e-14 320-399
no_ID  
Coil coil coiled-coil NA 68-89
Gene3D G3DSA:1.10.245.10 no description 5.8e-25 314-405
HMMPanther PTHR13844 BRG-1 8.8e-133 57-528
HMMPanther PTHR13844:SF0 SUBFAMILY 8.8e-133 57-528
Seg seg seg NA 53-90
Wolf-PSORT
Lj4g3v1388320.1	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1388320.1