Miyakogusa Predicted Gene

Lj4g3v1345780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K4F6_SOYBN 1044 77.2 83.7 (tr|K7K4F6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39350.1 674 50.1 70.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15750929-15752962 FORWARD LENGTH=677
Medicago Medtr1g112500.1 1006 74.7 84.7 | pentatricopeptide (PPR) repeat protein | HC | chr1:50925869-50923259 | 20130731
Soybean Glyma01g38300.1 992 81.5 88.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1345780.1 length: 727 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.1 251-275
555-579
HMMPfam PF13041 PPR_2 9.5e-14 76-122
176-222
277-323
382-424
480-528
HMMPfam PF13812 PPR_3 0.082 149-175
HMMTigr TIGR00756 PPR: 0.00024 76-107
178-212
279-312
382-413
484-516
518-546
ProfileScan PS51375 PPR 5.382 7-41
74-108
176-210
145-175
110-144
277-311
246-276
211-245
312-346
378-412
413-447
481-515
516-546
552-582
618-653
IPR003440 Glycosyl transferase, family 48
Cellular Component GO:0000148 1,3-beta-D-glucan synthase complex    
Molecular Function GO:0003843 1,3-beta-D-glucan synthase activity    
Biological Process GO:0006075 (1->3)-beta-D-glucan biosynthetic process    
Cellular Component GO:0016020 membrane    
HMMPfam PF02364 Glucan_synthase 1.9e-15 663-721
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00016 172-206
611-640
no_ID  
HMMPanther PTHR24015 FAMILY 1.1e-211 3-644
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.1e-211 3-644
Seg seg seg NA 35-65
478-491
Wolf-PSORT
Lj4g3v1345780.1	mito 8, chlo 4, cyto_mito 4, mito_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1345780.1