Miyakogusa Predicted Gene

Lj4g3v1335070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQC8_SOYBN 967 85.2 89.6 (tr|I1KQC8) Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial OS=Glycine max GN=GATB PE=3 SV=1
TAIR_pep AT1G48520.1 831 71.8 83.4 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-17942540 FORWARD LENGTH=550
Medicago Medtr5g055940.1 909 80.7 87.3 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | HC | chr5:23052488-23047084 | 20130731
Soybean Glyma08g05190.1 967 85.2 89.6  
LJGI gnl|LJGI|TC80819 1005 98.4 98.4 similar to UniRef100_A7NXK2 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1335070.1 length: 546 aa.
IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related
method AccNumber shortName E-value location
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
superfamily SSF89095 GatB/YqeY 2.2e-31 390-543
IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HAMAP MF_00121 GatB 37.340 65-543
HMMTigr TIGR00133 gatB: 1.8e-178 65-543
IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic
Molecular Function GO:0016874 ligase activity    
HMMPfam PF02934 GatB_N 1.6e-117 67-357
IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
PatternScan PS01234 GATB NA 210-224
IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPanther PTHR11659 GLUTAMYL-TRNA(GLN) 6.1e-245 1-546
IPR018027 Asn/Gln amidotransferase
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPfam PF02637 GatB_Yqey 1e-50 395-542
HMMSmart SM00845 GatB 3.3e-70 395-542
no_ID  
Seg seg seg NA 33-50
445-457
superfamily SSF55931 Glutamine 6.4e-118 67-364
Wolf-PSORT
Lj4g3v1335070.1	chlo 10, nucl 2, plas 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1335070.1