Miyakogusa Predicted Gene

Lj4g3v1327620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K0E9_SOYBN 239 82.0 88.7 (tr|I1K0E9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G11880.1 186 68.0 78.7 | Symbols: AGL14 | AGAMOUS-like 14 | chr4:7143512-7147108 FORWARD LENGTH=221
Medicago Medtr4g102530.2 216 78.0 85.3 | MADS-box transcription factor | HC | chr4:42507093-42499516 | 20130731
Soybean Glyma05g03660.4 239 82.0 88.7  
LJGI gnl|LJGI|TC71124 1156 98.5 98.5 similar to UniRef100_A1XG54 Cluster: SOC1; n=1; Glycine max|Rep: SOC1 - Glycine max (Soybean), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1327620.1 length: 205 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 3.4e-31 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 2.1e-28 9-59
HMMSmart SM00432 no description 8.4e-41 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 32.071 1-61
superfamily SSF55455 SRF-like 4.3e-30 2-98
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 1.8e-15 87-176
ProfileScan PS51297 K_BOX 13.466 91-181
no_ID  
Coil coil coiled-coil NA 147-175
HMMPanther PTHR11945 MADS 3.3e-63 1-197
HMMPanther PTHR11945:SF19 MADS 3.3e-63 1-197
Seg seg seg NA 151-171
186-201
Wolf-PSORT
Lj4g3v1327620.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1327620.1