Miyakogusa Predicted Gene

Lj4g3v1327520.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T486_LOTJA 362 88.9 88.9 (tr|I3T486) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G12530.1 141 39.2 51.0 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:4269122-4270771 REVERSE LENGTH=193

Medicago Medtr4g102360.1 323 72.0 78.4 | hypothetical protein | HC | chr4:42418810-42415193 | 20130731

Soybean Glyma17g14250.1 342 73.1 79.6

LJGI gnl|LJGI|TC61832 1429 99.7 99.7 weakly similar to UniRef100_Q9LN90 Cluster: T12C24.7; n=1; Arabidopsis thaliana|Rep: T12C24.7 - Arabidopsis thaliana (Mouse-ear cress), partial (41%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v1327520.1 length: 243 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 25-35
160-170

Wolf-PSORT

Lj4g3v1327520.1 nucl 12, chlo 1, extr 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v1327520.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T486_LOTJA	362	88.9	88.9	(tr\|I3T486) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G12530.1	141	39.2	51.0	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:4269122-4270771 REVERSE LENGTH=193
Medicago	Medtr4g102360.1	323	72.0	78.4	\| hypothetical protein \| HC \| chr4:42418810-42415193 \| 20130731
Soybean	Glyma17g14250.1	342	73.1	79.6
LJGI	gnl\|LJGI\|TC61832	1429	99.7	99.7	weakly similar to UniRef100_Q9LN90 Cluster: T12C24.7; n=1; Arabidopsis thaliana\|Rep: T12C24.7 - Arabidopsis thaliana (Mouse-ear cress), partial (41%)

no_ID
Lj4g3v1327520.1				length: 243 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	25-35 160-170