Miyakogusa Predicted Gene
- Lj4g3v1302690.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JK82_MEDTR |
519 |
82.5 |
89.4 |
(tr|G7JK82) Sterol-4-methyl-oxidase OS=Medicago truncatula GN=MTR_4g102060 PE=4 SV=1 |
| TAIR_pep |
AT4G12110.1 |
449 |
71.4 |
83.0 |
| Symbols: SMO1-1, ATSMO1, ATSMO1-1 | sterol-4alpha-methyl oxidase 1-1 | chr4:7254197-7256004 FORWARD LENGTH=298 |
| Medicago |
Medtr4g102060.1 |
519 |
82.5 |
89.4 |
| sterol C4-methyl oxidase 1-2 | HC | chr4:42239567-42243413 | 20130731 |
| Soybean |
Glyma05g03990.1 |
498 |
82.4 |
87.2 |
|
| LJGI |
gnl|LJGI|TC61840 |
1457 |
100.0 |
100.0 |
similar to UniRef100_Q71V05 Cluster: Sterol-4-methyl-oxidase; n=1; Arabidopsis thaliana|Rep: Sterol-4-methyl-oxidase - Arabidopsis thaliana (Mouse-ear cress), partial (91%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1302690.1 |
length: 302 aa. |
| IPR006694 |
Fatty acid hydroxylase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005506 |
iron ion binding |
|
|
| Biological Process |
GO:0006633 |
fatty acid biosynthetic process |
|
|
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF04116 |
FA_hydroxylase |
8.6e-20 |
131-243 |
| no_ID |
|
| HMMPanther |
PTHR11863 |
STEROL |
7.4e-188 |
1-282 |
| HMMPanther |
PTHR11863:SF18 |
SUBFAMILY |
7.4e-188 |
1-282 |
| Seg |
seg |
seg |
NA |
232-246 |
- Wolf-PSORT
Lj4g3v1302690.1 cyto 7, plas 2, chlo 1, nucl 1, mito 1, E.R. 1, cysk 1, chlo_mito 1, cysk_nucl 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1302690.1 |
|