Miyakogusa Predicted Gene

Lj4g3v1288490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J9Z9_SOYBN 210 61.8 64.4 (tr|I1J9Z9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G12050.1 147 44.3 53.6 | Symbols: | Predicted AT-hook DNA-binding family protein | chr4:7220139-7221158 REVERSE LENGTH=339
Medicago Medtr5g011520.1 179 54.6 59.2 | AT hook motif DNA-binding family protein | HC | chr5:3333209-3331446 | 20130731
Soybean Glyma01g42230.1 210 61.8 64.4  
LJGI gnl|LJGI|TC79303 408 91.4 91.4 similar to UniRef100_A7QK88 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1288490.1 length: 189 aa.
IPR005175 Domain of unknown function DUF296
method AccNumber shortName E-value location
HMMPfam PF03479 DUF296 4.3e-39 1-112
IPR014476 Predicted AT-hook DNA-binding
HMMPIR PIRSF016021 Predicted 9.7e-64 1-189
no_ID  
Gene3D G3DSA:3.30.1330.80 no description 9.5e-34 2-122
HMMPanther PTHR31100 FAMILY 1.7e-86 1-189
Seg seg seg NA 57-75
81-93
127-155
superfamily SSF117856 AF0104/ALDC/Ptd012-like 6.7e-33 1-131
Wolf-PSORT
Lj4g3v1288490.1	nucl 4, plas 3.5, E.R._plas 3, chlo 2, cysk_nucl 2, E.R. 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1288490.1