Miyakogusa Predicted Gene
- Lj4g3v1286210.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MV03_SOYBN |
148 |
66.7 |
80.2 |
(tr|I1MV03) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G35730.1 |
69.7 |
36.0 |
54.1 |
| Symbols: | Heavy metal transport/detoxification superfamily protein | chr2:15020559-15021475 REVERSE LENGTH=115 |
| Medicago |
Medtr4g101025.1 |
73.9 |
56.9 |
77.6 |
| hypothetical protein | HC | chr4:41720247-41718426 | 20130731 |
| Soybean |
Glyma17g15000.1 |
148 |
66.7 |
80.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1286210.1 |
length: 111 aa. |
| IPR006121 |
Heavy metal-associated domain, HMA |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0030001 |
metal ion transport |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| HMMPfam |
PF00403 |
HMA |
8.2e-10 |
38-83 |
| ProfileScan |
PS50846 |
HMA_2 |
9.370 |
32-76 |
| superfamily |
SSF55008 |
HMA, |
9.3e-07 |
27-76 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.70.100 |
no description |
1.6e-08 |
36-78 |
| HMMPanther |
PTHR22814 |
COPPER |
7.9e-15 |
25-75 |
| HMMPanther |
PTHR22814:SF55 |
OS05G0534500 |
7.9e-15 |
25-75 |
- Wolf-PSORT
Lj4g3v1286210.1 chlo 4, cyto 4, nucl 2, plas 2, chlo_mito 2, nucl_plas 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1286210.1 |
|