Miyakogusa Predicted Gene

Lj4g3v1273710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3S2M8_LOTJA 380 87.0 87.0 (tr|I3S2M8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G45140.1 240 57.8 70.6 | Symbols: PVA12 | plant VAP homolog 12 | chr2:18611029-18612971 FORWARD LENGTH=239
Medicago Medtr4g101020.1 298 69.0 77.0 | VAMP-associated protein | HC | chr4:41712222-41717671 | 20130731
Soybean Glyma05g04580.1 300 69.4 75.9  
LJGI gnl|LJGI|TC80032 1415 99.6 99.6 similar to UniRef100_A7QY86 Cluster: Chromosome chr2 scaffold_241, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_241, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1273710.1 length: 241 aa.
IPR000535 Major sperm protein
method AccNumber shortName E-value location
Molecular Function GO:0005198 structural molecule activity    
HMMPfam PF00635 Motile_Sperm 7.9e-33 7-111
ProfileScan PS50202 MSP 30.558 6-126
IPR008962 PapD-like
Gene3D G3DSA:2.60.40.360 no description 4.7e-40 4-124
superfamily SSF49354 PapD-like 1.5e-47 1-127
IPR016763 Vesicle-associated membrane protein
HMMPIR PIRSF019693 VAMP-associated 7e-93 1-239
no_ID  
Coil coil coiled-coil NA 170-212
HMMPanther PTHR10809 VESICLE-ASSOCIATED 5.2e-97 1-240
HMMPanther PTHR10809:SF6 VESICLE-ASSOCIATED 5.2e-97 1-240
Seg seg seg NA 123-135
137-151
217-238
Wolf-PSORT
Lj4g3v1273710.1	cyto 4, chlo 3, plas 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1273710.1