Miyakogusa Predicted Gene

Lj4g3v1260340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6T3R4_SOYBN 199 71.9 78.5 (tr|C6T3R4) 60S ribosomal protein L27 OS=Glycine max PE=2 SV=1
TAIR_pep AT3G22230.1 191 69.6 75.6 | Symbols: | Ribosomal L27e protein family | chr3:7844136-7844543 REVERSE LENGTH=135
Medicago Medtr2g006170.1 196 71.9 77.0 | 60S ribosomal protein L27-1 | HC | chr2:483554-482592 | 20130731
Soybean Glyma05g26320.1 199 71.9 78.5  
LJGI gnl|LJGI|TC66478 285 83.8 83.8 similar to UniRef100_Q05462 Cluster: 60S ribosomal protein L27; n=1; Pisum sativum|Rep: 60S ribosomal protein L27 - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1260340.1 length: 135 aa.
IPR001141 Ribosomal protein L27e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD009396 RL27_PEA_Q05462; 1e-21 66-135
HMMPanther PTHR10497 60S 2.2e-85 1-135
HMMPfam PF01777 Ribosomal_L27e 3.2e-31 52-135
IPR005824 KOW
HMMPfam PF00467 KOW 0.00015 7-36
IPR014722 Ribosomal protein L2 domain 2
Gene3D G3DSA:2.30.30.30 no description 6.8e-19 3-111
IPR018262 Ribosomal protein L27e, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS01107 RIBOSOMAL_L27E NA 124-135
no_ID  
Coil coil coiled-coil NA 100-121
HMMPanther PTHR10497:SF0 60S 2.2e-85 1-135
Seg seg seg NA 55-65
111-123
Wolf-PSORT
Lj4g3v1260340.1	cyto 8, chlo 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1260340.1