Miyakogusa Predicted Gene

Lj4g3v1259110.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JIW4_MEDTR 848 75.9 80.2 (tr|G7JIW4) Asparaginyl-tRNA synthetase OS=Medicago truncatula GN=MTR_4g100920 PE=3 SV=1
TAIR_pep AT4G17300.1 756 75.0 82.6 | Symbols: NS1, OVA8, ATNS1 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:9681558-9684833 FORWARD LENGTH=567
Medicago Medtr4g100920.1 862 78.6 83.0 | asparagine-tRNA ligase | HC | chr4:41665503-41658740 | 20130731
Soybean Glyma05g04660.1 833 80.9 86.0  
LJGI gnl|LJGI|BP028401 741 99.0 99.0 homologue to UniRef100_A7R6A5 Cluster: Chromosome undetermined scaffold_1205, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1205, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1259110.2 length: 540 aa.
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
FPrintScan PR01042 TRNASYNTHASP 2.4e-14 281-293
297-310
455-471
495-509
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 3.9e-66 181-534
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 3.2e-09 89-164
IPR004522 Asparagine-tRNA ligase, class IIb
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004816 asparagine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006421 asparaginyl-tRNA aminoacylation    
HAMAP MF_00534 Asn_tRNA_synth 44.020 72-540
HMMPanther PTHR22594:SF6 ASPARTYL-TRNA 4.3e-214 63-533
HMMTigr TIGR00457 asnS: 5.8e-186 83-540
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 15.942 202-530
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.6e-15 82-169
superfamily SSF50249 Nucleic 1.6e-19 65-169
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 4.3e-214 63-533
no_ID  
Coil coil coiled-coil NA 467-488
Gene3D G3DSA:3.30.930.10 no description 2.1e-114 272-536
Seg seg seg NA 30-48
77-90
152-167
470-484
superfamily SSF55681 Class 5.6e-95 158-540
Wolf-PSORT
Lj4g3v1259110.2	chlo_mito 7.33333, mito 7, chlo 6.5, cyto_mito 4.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1259110.2