Miyakogusa Predicted Gene

Lj4g3v1259110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JIW4_MEDTR 561 75.3 80.5 (tr|G7JIW4) Asparaginyl-tRNA synthetase OS=Medicago truncatula GN=MTR_4g100920 PE=3 SV=1
TAIR_pep AT4G17300.1 490 74.8 81.8 | Symbols: NS1, OVA8, ATNS1 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:9681558-9684833 FORWARD LENGTH=567
Medicago Medtr4g100920.2 562 75.3 80.5 | asparagine-tRNA ligase | HC | chr4:41665479-41658740 | 20130731
Soybean Glyma05g04660.1 541 78.9 85.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1259110.1 length: 375 aa.
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 7.2e-27 181-355
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 1.8e-09 89-164
IPR004522 Asparagine-tRNA ligase, class IIb
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004816 asparagine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006421 asparaginyl-tRNA aminoacylation    
HMMPanther PTHR22594:SF6 ASPARTYL-TRNA 1e-119 63-373
HMMTigr TIGR00457 asnS: 4e-104 83-373
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 9.090 202-335
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 8.5e-16 82-169
superfamily SSF50249 Nucleic 1.6e-19 65-169
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 1e-119 63-373
no_ID  
Gene3D G3DSA:3.30.930.10 no description 1.8e-53 272-366
Seg seg seg NA 30-48
77-90
152-167
superfamily SSF55681 Class 5.1e-43 158-362
Wolf-PSORT
Lj4g3v1259110.1	chlo 9.5, chlo_mito 7.33333, mito 4, cyto_mito 2.83333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1259110.1