Miyakogusa Predicted Gene

Lj4g3v1212310.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MLP9_SOYBN 688 82.9 88.1 (tr|K7MLP9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G17610.1 491 63.8 76.7 | Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr4:9805652-9814910 REVERSE LENGTH=1850
Medicago Medtr4g099300.1 666 80.1 86.6 | tRNA/rRNA methyltransferase SpoU family protein | HC | chr4:41173123-41201425 | 20130731
Soybean Glyma17g15760.1 679 80.7 85.7  
LJGI gnl|LJGI|AU088830 775 99.7 99.7 similar to UniRef100_A7R275 Cluster: Chromosome undetermined scaffold_406, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_406, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1212310.2 length: 404 aa.
IPR001537 tRNA/rRNA methyltransferase, SpoU
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006396 RNA processing    
Molecular Function GO:0008173 RNA methyltransferase activity    
HMMPfam PF00588 SpoU_methylase 7.2e-27 254-395
no_ID  
Gene3D G3DSA:3.40.1280.10 no description 6.6e-54 247-402
HMMPanther PTHR12029 RNA 1e-110 10-402
HMMPanther PTHR12029:SF11 23S 1e-110 10-402
Seg seg seg NA 227-247
superfamily SSF75217 alpha/beta 9.2e-35 228-402
Wolf-PSORT
Lj4g3v1212310.2	chlo 5, cyto 2, extr 2, vacu 2, mito 1, plas 1, E.R. 1, cyto_nucl 1, cyto_pero 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1212310.2 Not targeted -43.049 -2.017 -3.338 60.30% -37.695