Miyakogusa Predicted Gene

Lj4g3v1202200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MLR1_SOYBN 647 76.8 83.7 (tr|K7MLR1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G17616.1 376 46.0 64.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:9819608-9821632 FORWARD LENGTH=674
Medicago Medtr4g099200.1 655 74.5 83.0 | PPR containing plant protein | HC | chr4:41103641-41099252 | 20130731
Soybean Glyma17g15910.1 649 76.8 83.7  
LJGI gnl|LJGI|TC72890 638 99.4 99.4 similar to UniRef100_A7R575 Cluster: Chromosome undetermined scaffold_896, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_896, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1202200.1 length: 423 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1 194-220
HMMPfam PF13041 PPR_2 1e-07 269-315
HMMPfam PF13812 PPR_3 0.019 345-373
HMMTigr TIGR00756 PPR: 0.00014 279-303
ProfileScan PS51375 PPR 7.278 26-56
191-225
156-190
268-302
303-333
342-376
no_ID  
HMMPanther PTHR24015 FAMILY 6.8e-20 163-383
Seg seg seg NA 138-147
Wolf-PSORT
Lj4g3v1202200.1	nucl 5, chlo 3, cyto 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1202200.1