Miyakogusa Predicted Gene

Lj4g3v1154490.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MVC2_SOYBN 749 70.1 76.8 (tr|I1MVC2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G18020.6 414 46.1 58.4 | Symbols: APRR2 | CheY-like two-component responsive regulator family protein | chr4:10003738-10006682 REVERSE LENGTH=535
Medicago Medtr4g098870.3 728 69.9 77.9 | two-component response regulator-APRR2-like protein | HC | chr4:40805773-40799442 | 20130731
Soybean Glyma17g16360.1 749 70.1 76.8  
LJGI gnl|LJGI|TC80121 1110 99.5 99.5 similar to UniRef100_A7PCE1 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1154490.2 length: 538 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 1.4e-11 312-361
IPR001789 Signal transduction response regulator, receiver domain
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 6.5e-07 20-126
HMMSmart SM00448 cheY-homologous 0.00024 18-128
ProfileScan PS50110 RESPONSE_REGULATORY 19.090 19-132
IPR006447 Myb domain, plants
HMMTigr TIGR01557 myb_SHAQKYF: 1.3e-24 309-364
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.4e-26 307-366
superfamily SSF46689 Homeodomain-like 2.3e-18 305-368
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 4.2e-17 15-133
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 15.160 306-365
IPR018522 DNA topoisomerase, type IIA, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006265 DNA topological change    
PatternScan PS00177 TOPOISOMERASE_II NA 22-30
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 3.8e-16 16-163
HMMPanther PTHR31312 FAMILY 1.5e-61 13-538
Seg seg seg NA 406-420
488-497
501-513
Wolf-PSORT
Lj4g3v1154490.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1154490.2