Miyakogusa Predicted Gene

Lj4g3v1140700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MVE0_SOYBN 1093 77.0 82.9 (tr|I1MVE0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G35330.2 726 55.8 69.8 | Symbols: | RING/U-box superfamily protein | chr2:14869260-14871673 FORWARD LENGTH=711
Medicago Medtr4g098560.1 889 66.4 74.5 | MND1-interacting protein | HC | chr4:40623187-40627435 | 20130731
Soybean Glyma17g16560.1 1093 77.0 82.9  
LJGI gnl|LJGI|CN824962 1334 100.0 100.0 similar to UniRef100_A7PCB1 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1140700.1 length: 718 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.0034 664-703
ProfileScan PS50089 ZF_RING_2 10.704 664-704
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2e-10 650-711
no_ID  
Coil coil coiled-coil NA 447-489
503-545
566-587
588-623
640-661
HMMPanther PTHR10044 INHIBITOR 1.6e-67 310-718
HMMPanther PTHR10044:SF81 SUBFAMILY 1.6e-67 310-718
HMMPfam PF13920 zf-C3HC4_3 5.2e-12 661-709
Seg seg seg NA 52-66
140-156
242-251
567-577
superfamily SSF57850 RING/U-box 3.8e-10 656-716
Wolf-PSORT
Lj4g3v1140700.1	chlo 7, nucl 5, cysk 1, cyto_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1140700.1