Miyakogusa Predicted Gene

Lj4g3v1108180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MG42_SOYBN 1183 69.8 77.8 (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
TAIR_pep AT1G68990.1 999 62.3 75.5 | Symbols: MGP3 | male gametophyte defective 3 | chr1:25935499-25940755 REVERSE LENGTH=976
Medicago Medtr8g065900.1 939 79.8 87.3 | DNA-directed RNA polymerase-like protein | HC | chr8:27401434-27394114 | 20130731
Soybean Glyma18g51160.1 997 68.8 81.6  
LJGI gnl|LJGI|CB826632 115 100.0 100.0 similar to UniRef100_A7PAG7 Cluster: DNA-directed RNA polymerase; n=1; Vitis vinifera|Rep: DNA-directed RNA polymerase - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1108180.1 length: 853 aa.
IPR002092 DNA-directed RNA polymerase, phage-type
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPanther PTHR10102 DNA-DIRECTED 1.3e-272 153-853
HMMPfam PF00940 RNA_pol 1.2e-88 616-853
PatternScan PS00489 RNA_POL_PHAGE_2 NA 777-791
PatternScan PS00900 RNA_POL_PHAGE_1 NA 704-715
IPR024075 DNA-directed RNA polymerase, helix hairpin domain
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Gene3D G3DSA:1.10.287.260 no description 1.1e-29 494-576
no_ID  
Coil coil coiled-coil NA 165-186
307-342
Gene3D G3DSA:1.10.1320.10 no description 1.5e-95 146-493
Gene3D G3DSA:1.10.150.20 no description 4.6e-41 726-853
Gene3D G3DSA:1.10.287.280 no description 4.3e-31 616-696
Gene3D G3DSA:3.30.70.370 no description 3.3e-26 698-724
Seg seg seg NA 13-32
81-92
119-143
308-334
superfamily SSF56672 DNA/RNA 7.8e-205 130-853
Wolf-PSORT
Lj4g3v1108180.1	chlo 9, nucl 2, mito 1.5, cyto_mito 1.5, cysk_nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1108180.1