Miyakogusa Predicted Gene
- Lj4g3v1107950.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1107950.1 |
length: 1203 aa. |
IPR003888 |
FY-rich, N-terminal |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0005634 |
nucleus |
|
|
ProfileScan |
PS51542 |
FYRN |
17.330 |
14-73 |
IPR003889 |
FY-rich, C-terminal |
Cellular Component |
GO:0005634 |
nucleus |
|
|
HMMPfam |
PF05965 |
FYRC |
4.3e-06 |
75-139 |
ProfileScan |
PS51543 |
FYRC |
16.684 |
74-152 |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
Molecular Function |
GO:0005515 |
protein binding |
|
|
Gene3D |
G3DSA:2.130.10.10 |
no description |
7.8e-07 |
1128-1193 |
IPR017986 |
WD40-repeat-containing domain |
Molecular Function |
GO:0005515 |
protein binding |
|
|
superfamily |
SSF50978 |
WD40 |
3.6e-08 |
866-1194 |
no_ID |
|
Seg |
seg |
seg |
NA |
82-91 |
- Wolf-PSORT
Lj4g3v1107950.1 nucl 5, cyto 3, chlo 2, mito 2, cysk 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj4g3v1107950.1 |
|