Miyakogusa Predicted Gene

Lj4g3v1107690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SK89_LOTJA 419 82.7 82.7 (tr|I3SK89) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G46860.1 309 63.9 71.4 | Symbols: VAM3, ATVAM3, SYP22, ATSYP22, SGR3 | Syntaxin/t-SNARE family protein | chr5:19012342-19013795 REVERSE LENGTH=268
Medicago Medtr8g066340.1 402 79.6 81.2 | syntaxin of plants protein | HC | chr8:27589128-27583696 | 20130731
Soybean Glyma16g08200.1 403 79.5 81.1  
LJGI gnl|LJGI|TC61821 1635 100.0 100.0 homologue to UniRef100_Q8LJR4 Cluster: Syntaxin; n=1; Glycine max|Rep: Syntaxin - Glycine max (Soybean), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1107690.1 length: 273 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 1.2e-20 185-247
HMMSmart SM00397 Helical 1.6e-18 175-242
ProfileScan PS50192 T_SNARE 18.061 180-242
IPR006011 Syntaxin, N-terminal
Cellular Component GO:0016020 membrane    
HMMPfam PF00804 Syntaxin 5.5e-07 26-112
HMMSmart SM00503 Syntaxin 2.8e-24 14-127
IPR006012 Syntaxin/epimorphin, conserved site
Molecular Function GO:0005484 SNAP receptor activity    
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00914 SYNTAXIN NA 186-225
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 6.9e-40 16-235
no_ID  
Gene3D G3DSA:1.20.58.70 no description 5.1e-35 27-236
HMMPanther PTHR19957 SYNTAXIN 4.9e-143 22-271
HMMPanther PTHR19957:SF11 SYNTAXIN, 4.9e-143 22-271
Seg seg seg NA 174-199
230-246
255-271
Wolf-PSORT
Lj4g3v1107690.1	cyto 7, E.R. 2, golg 2, nucl 1, mito 1, vacu 1, golg_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1107690.1