Miyakogusa Predicted Gene

Lj4g3v1107610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J6A5_SOYBN 491 63.8 69.5 (tr|I1J6A5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G32360.1 336 51.3 58.2 | Symbols: | Zinc finger (CCCH-type) family protein | chr1:11673325-11675162 FORWARD LENGTH=384
Medicago Medtr8g066730.1 470 63.7 68.3 | zinc finger CCCH domain protein | HC | chr8:27741156-27744224 | 20130731
Soybean Glyma01g10610.1 445 60.2 65.0  
LJGI gnl|LJGI|TC78910 874 99.8 99.8 homologue to UniRef100_A7PC73 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1107610.1 length: 382 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 3.9e-16 96-131
170-200
257-291
HMMPfam PF00642 zf-CCCH 1.4e-11 99-123
262-287
HMMSmart SM00356 zinc 8.8e-09 98-124
172-199
261-288
ProfileScan PS50103 ZF_C3H1 15.309 98-125
172-200
261-289
no_ID  
HMMPanther PTHR12547 CCCH 4.7e-37 33-291
HMMPanther PTHR12547:SF44 ZINC 4.7e-37 33-291
Seg seg seg NA 16-28
60-93
212-257
superfamily SSF90229 CCCH 4.5e-08 256-295
93-131
168-201
Wolf-PSORT
Lj4g3v1107610.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1107610.1