Miyakogusa Predicted Gene

Lj4g3v1073610.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KWX8_SOYBN 570 70.5 76.0 (tr|I1KWX8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G35530.1 402 58.8 70.5 | Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409

Medicago Medtr8g070820.1 537 71.5 80.1 | bZIP transcription factor family protein | HC | chr8:30001144-30008055 | 20130731

Soybean Glyma08g34280.1 570 70.5 76.0

LJGI gnl|LJGI|TC75666 1294 100.0 100.0 similar to UniRef100_Q94KA7 Cluster: BZIP transcription factor 3; n=1; Phaseolus vulgaris|Rep: BZIP transcription factor 3 - Phaseolus vulgaris (Kidney bean) (French bean), partial (54%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v1073610.2 length: 398 aa.

IPR004827 Basic-leucine zipper domain

method AccNumber shortName E-value location

Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity

Biological Process GO:0006355 regulation of transcription, DNA-dependent

Molecular Function GO:0043565 sequence-specific DNA binding

HMMPfam PF00170 bZIP_1 1.1e-19 294-356

HMMSmart SM00338 basic 5.4e-22 294-358

PatternScan PS00036 BZIP_BASIC NA 301-316

ProfileScan PS50217 BZIP 12.817 296-359

IPR012900 G-box binding, MFMR

Molecular Function GO:0003677 DNA binding

Cellular Component GO:0005634 nucleus

Biological Process GO:0006351 transcription, DNA-dependent

Biological Process GO:0006355 regulation of transcription, DNA-dependent

HMMPfam PF07777 MFMR 1.8e-62 1-194

no_ID

Coil coil coiled-coil NA 314-363

Gene3D G3DSA:1.20.5.170 no description 1.4e-17 287-352

HMMPanther PTHR22952 CAMP-RESPONSE 8.1e-125 48-363

HMMPanther PTHR22952:SF47 OS01G0808100 8.1e-125 48-363

Seg seg seg NA 8-22
172-186

Wolf-PSORT

Lj4g3v1073610.2 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v1073610.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KWX8_SOYBN	570	70.5	76.0	(tr\|I1KWX8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G35530.1	402	58.8	70.5	\| Symbols: bZIP16, AtbZIP16 \| basic region/leucine zipper transcription factor 16 \| chr2:14923280-14926025 REVERSE LENGTH=409
Medicago	Medtr8g070820.1	537	71.5	80.1	\| bZIP transcription factor family protein \| HC \| chr8:30001144-30008055 \| 20130731
Soybean	Glyma08g34280.1	570	70.5	76.0
LJGI	gnl\|LJGI\|TC75666	1294	100.0	100.0	similar to UniRef100_Q94KA7 Cluster: BZIP transcription factor 3; n=1; Phaseolus vulgaris\|Rep: BZIP transcription factor 3 - Phaseolus vulgaris (Kidney bean) (French bean), partial (54%)

IPR004827	Basic-leucine zipper domain
Lj4g3v1073610.2				length: 398 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003700	sequence-specific DNA binding transcription factor activity
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
Molecular Function	GO:0043565	sequence-specific DNA binding
HMMPfam	PF00170	bZIP_1	1.1e-19	294-356
HMMSmart	SM00338	basic	5.4e-22	294-358
PatternScan	PS00036	BZIP_BASIC	NA	301-316
ProfileScan	PS50217	BZIP	12.817	296-359
IPR012900	G-box binding, MFMR
Molecular Function	GO:0003677	DNA binding
Cellular Component	GO:0005634	nucleus
Biological Process	GO:0006351	transcription, DNA-dependent
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
HMMPfam	PF07777	MFMR	1.8e-62	1-194
no_ID
Coil	coil	coiled-coil	NA	314-363
Gene3D	G3DSA:1.20.5.170	no description	1.4e-17	287-352
HMMPanther	PTHR22952	CAMP-RESPONSE	8.1e-125	48-363
HMMPanther	PTHR22952:SF47	OS01G0808100	8.1e-125	48-363
Seg	seg	seg	NA	8-22 172-186