Miyakogusa Predicted Gene
- Lj4g3v1073400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SV51_LOTJA |
396 |
92.3 |
92.3 |
(tr|I3SV51) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G11680.1 |
307 |
72.9 |
79.8 |
| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3759463-3760634 FORWARD LENGTH=207 |
| Medicago |
Medtr8g070860.1 |
352 |
82.7 |
86.5 |
| arabinogalactan protein | HC | chr8:30021958-30024592 | 20130731 |
| Soybean |
Glyma08g35470.1 |
359 |
83.7 |
87.5 |
|
| LJGI |
gnl|LJGI|TC57221 |
1243 |
100.0 |
100.0 |
similar to UniRef100_A9S1T9 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (65%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1073400.1 |
length: 208 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
140-155 |
| superfamily |
SSF50729 |
PH |
5.3e-21 |
1-133 |
- Wolf-PSORT
Lj4g3v1073400.1 pero 5, nucl 3, cyto 2, extr 2, chlo 1, E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1073400.1 |
|