Miyakogusa Predicted Gene

Lj4g3v1062150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LWK5_SOYBN 1003 79.0 85.0 (tr|I1LWK5) Structural maintenance of chromosomes protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G48600.2 877 69.1 79.7 | Symbols: SMC3 | structural maintenance of chromosome 3 | chr5:19701908-19709091 FORWARD LENGTH=1244
Medicago Medtr8g072890.1 983 77.9 83.6 | structural maintenance of chromosomes protein | HC | chr8:30809876-30822392 | 20130731
Soybean Glyma13g05430.1 1003 79.0 85.0  
LJGI gnl|LJGI|BP037703 515 98.9 98.9 homologue to UniRef100_A7R831 Cluster: Chromosome undetermined scaffold_2214, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_2214, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1062150.1 length: 633 aa.
IPR003395 RecF/RecN/SMC
method AccNumber shortName E-value location
HMMPfam PF02463 SMC_N 2.7e-32 221-617
IPR010935 SMCs flexible hinge
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0051276 chromosome organization    
HMMPfam PF06470 SMC_hinge 2.6e-06 17-61
superfamily SSF75553 Smc 1.2e-17 19-126
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.8e-39 286-627
no_ID  
Coil coil coiled-coil NA 111-167
198-233
269-304
311-346
353-381
437-475
Gene3D G3DSA:3.40.50.300 no description 4.7e-29 489-624
HMMPanther PTHR18937 STRUCTURAL 2.4e-238 1-632
HMMPanther PTHR18937:SF13 STRUCTURAL 2.4e-238 1-632
Seg seg seg NA 83-99
233-246
277-303
Wolf-PSORT
Lj4g3v1062150.1	cyto 12, nucl 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1062150.1