Miyakogusa Predicted Gene
- Lj4g3v0974400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K982_SOYBN |
232 |
67.4 |
77.9 |
(tr|I1K982) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G11470.1 |
188 |
56.1 |
69.4 |
| Symbols: | bromo-adjacent homology (BAH) domain-containing protein | chr5:3662757-3667041 REVERSE LENGTH=757 |
| Medicago |
Medtr3g109470.2 |
228 |
67.1 |
76.0 |
| bromo-adjacent-like (BAH) domain protein | HC | chr3:50637118-50623280 | 20130731 |
| Soybean |
Glyma06g08530.1 |
232 |
67.4 |
77.9 |
|
| LJGI |
gnl|LJGI|DC596088 |
708 |
99.5 |
99.5 |
similar to UniRef100_A7P5F6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0974400.1 |
length: 174 aa. |
| IPR001025 |
Bromo adjacent homology (BAH) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| HMMPfam |
PF01426 |
BAH |
2.3e-13 |
35-154 |
| HMMSmart |
SM00439 |
Bromo |
4.9e-06 |
34-160 |
| ProfileScan |
PS51038 |
BAH |
15.660 |
34-159 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
11-21 |
- Wolf-PSORT
Lj4g3v0974400.1 cyto 5, nucl 4.5, cysk_nucl 3.5, cysk 1.5, chlo 1, extr 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0974400.1 |
|