Miyakogusa Predicted Gene
- Lj4g3v0973380.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JCP4_SOYBN |
144 |
87.5 |
98.6 |
(tr|I1JCP4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G39250.1 |
100 |
63.2 |
80.9 |
| Symbols: ATRL1, RSM2, RL1 | RAD-like 1 | chr4:18271457-18271857 REVERSE LENGTH=100 |
| Medicago |
Medtr8g077380.1 |
133 |
79.2 |
91.7 |
| MYB family transcription factor | HC | chr8:32885066-32886142 | 20130731 |
| Soybean |
Glyma02g06240.1 |
144 |
87.5 |
98.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0973380.1 |
length: 151 aa. |
| IPR001005 |
SANT/Myb domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003682 |
chromatin binding |
|
|
| HMMSmart |
SM00717 |
SANT |
3.4e-06 |
80-131 |
| IPR009057 |
Homeodomain-like |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| superfamily |
SSF46689 |
Homeodomain-like |
1.6e-12 |
81-139 |
| IPR017884 |
SANT domain |
| ProfileScan |
PS51293 |
SANT |
9.019 |
79-133 |
| no_ID |
|
| HMMPanther |
PTHR25040 |
FAMILY |
1.3e-32 |
3-147 |
| HMMPanther |
PTHR25040:SF74 |
SUBFAMILY |
1.3e-32 |
3-147 |
- Wolf-PSORT
Lj4g3v0973380.1 cyto_nucl 4.5, golg 4, cyto 3, chlo 2, nucl 2, mito 2, chlo_mito 2, golg_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0973380.1 |
|