Miyakogusa Predicted Gene

Lj4g3v0962260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KDN2_MEDTR 215 56.7 65.7 (tr|G7KDN2) Zinc finger-homeodomain protein OS=Medicago truncatula GN=MTR_5g020510 PE=4 SV=1
TAIR_pep AT2G18350.1 170 46.6 59.1 | Symbols: AtHB24, HB24, ZHD6 | homeobox protein 24 | chr2:7971122-7971910 REVERSE LENGTH=262
Medicago Medtr5g020510.1 215 56.7 65.7 | homeobox domain, ZF-HD class protein | HC | chr5:7836628-7838042 | 20130731
Soybean Glyma11g07360.1 214 57.3 64.5  
LJGI gnl|LJGI|TC58585 1092 100.0 100.0 similar to UniRef100_A7PUT9 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0962260.1 length: 354 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
ProfileScan PS50071 HOMEOBOX_2 8.568 217-281
IPR006455 Homeodomain, ZF-HD class
HMMTigr TIGR01565 homeo_ZF_HD: 4.6e-27 219-276
IPR006456 ZF-HD homeobox protein, Cys/His-rich dimerisation domain
BlastProDom PD125774 Q9M9S0_ARATH_Q9M9S0; 5e-19 88-143
HMMPfam PF04770 ZF-HD_dimer 2.6e-29 88-142
HMMTigr TIGR01566 ZF_HD_prot_N: 1.9e-28 89-139
ProfileScan PS51523 ZF_HD_DIMER 25.327 90-139
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.8e-27 206-281
superfamily SSF46689 Homeodomain-like 7.2e-20 203-282
no_ID  
HMMPanther PTHR31948 FAMILY 2.4e-63 27-333
HMMPanther PTHR31948:SF0 SUBFAMILY 2.4e-63 27-333
Seg seg seg NA 13-33
47-52
55-67
77-87
171-196
279-295
Wolf-PSORT
Lj4g3v0962260.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0962260.1