Miyakogusa Predicted Gene

Lj4g3v0948900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JCQ7_SOYBN 1002 84.7 89.1 (tr|I1JCQ7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G66760.1 972 83.7 89.5 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 | chr5:26653776-26657224 FORWARD LENGTH=634
Medicago Medtr5g020050.3 994 84.5 89.3 | succinate dehydrogenase [ubiquinone] flavoprotein subunit | HC | chr5:7636353-7644043 | 20130731
Soybean Glyma02g06400.1 1002 84.7 89.1  
LJGI gnl|LJGI|TC58055 2282 100.0 100.0 homologue to UniRef100_A9TP02 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0948900.1 length: 561 aa.
IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00504 FRD_SDH_FAD_BINDING NA 80-89
IPR003953 FAD binding domain
HMMPfam PF00890 FAD_binding_2 2.4e-122 46-442
IPR011281 Succinate dehydrogenase, flavoprotein subunit
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR01816 sdhA_forward: 1.3e-268 43-559
IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0022900 electron transport chain    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11632:SF5 SUCCINATE 0 7-560
HMMTigr TIGR01812 sdhA_frdA_Gneg: 8.5e-215 46-559
IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.20.58.100 no description 3.2e-22 470-560
HMMPfam PF02910 Succ_DH_flav_C 6e-18 497-560
superfamily SSF46977 Succinate 5.5e-22 488-560
IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Gene3D G3DSA:3.90.700.10 no description 1.8e-42 281-386
superfamily SSF56425 Succinate 5e-62 274-392
no_ID  
Gene3D G3DSA:3.50.50.60 no description 2.4e-128 387-461
HMMPanther PTHR11632 SUCCINATE 0 7-560
Seg seg seg NA 12-21
47-63
547-559
superfamily SSF51905 FAD/NAD(P)-binding 1.6e-81 41-464
Wolf-PSORT
Lj4g3v0948900.1	mito 11.5, chlo_mito 7.5, chlo 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0948900.1