Miyakogusa Predicted Gene

Lj4g3v0937730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MNH4_SOYBN 549 58.7 62.3 (tr|I1MNH4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G50700.1 402 47.2 54.7 | Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain 2 | chr3:18840945-18842829 FORWARD LENGTH=452
Medicago Medtr2g099990.1 317 71.2 79.3 | C2H2-type zinc finger protein | HC | chr2:42897047-42899888 | 20130731
Soybean Glyma02g06510.1 520 57.2 60.7  
LJGI gnl|LJGI|TC60668 1685 100.0 100.0 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0937730.1 length: 525 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 62-82
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.949 60-82
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00015 59-82
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.4e+02 60-82
101-131
136-156
IPR022755 Zinc finger, double-stranded RNA binding
HMMPfam PF12171 zf-C2H2_jaz 6.7e-05 59-82
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 7.2e-134 28-402
HMMPanther PTHR10593:SF17 SUBFAMILY 7.2e-134 28-402
HMMPfam PF13894 zf-C2H2_4 1.7 136-157
Seg seg seg NA 133-144
209-229
263-295
336-352
412-421
437-457
479-497
superfamily SSF57667 C2H2 0.0002 131-174
59-84
Wolf-PSORT
Lj4g3v0937730.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0937730.1