Miyakogusa Predicted Gene

Lj4g3v0911380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6GX07_VITVI 654 50.2 55.6 (tr|F6GX07) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01020 PE=3 SV=1
TAIR_pep AT4G36870.2 434 71.3 77.9 | Symbols: BLH2, SAW1 | BEL1-like homeodomain 2 | chr4:17369423-17373723 FORWARD LENGTH=739
Medicago Medtr8g078480.2 605 57.3 61.5 | BEL1-related homeotic protein | HC | chr8:33455319-33463864 | 20130731
Soybean Glyma02g06730.1 605 58.9 62.4  
LJGI gnl|LJGI|TC70855 688 99.7 99.7 similar to UniRef100_A7PV26 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0911380.1 length: 792 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 2.4e-09 553-617
ProfileScan PS50071 HOMEOBOX_2 12.487 550-613
IPR006563 POX
HMMPfam PF07526 POX 4.4e-50 374-500
HMMSmart SM00574 domain 2.1e-71 369-501
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 2.2e-16 570-609
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.9e-27 556-619
superfamily SSF46689 Homeodomain-like 1.8e-17 551-628
no_ID  
Coil coil coiled-coil NA 619-650
HMMPanther PTHR11850 HOMEOBOX 4.1e-108 419-657
HMMPanther PTHR11850:SF15 HOMEOBOX 4.1e-108 419-657
Seg seg seg NA 5-14
29-42
61-70
81-88
127-132
193-206
221-242
253-266
293-309
364-368
409-422
625-647
649-661
665-677
704-715
Wolf-PSORT
Lj4g3v0911380.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0911380.1