Miyakogusa Predicted Gene
- Lj4g3v0891300.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LIM4_SOYBN |
213 |
84.7 |
90.3 |
(tr|K7LIM4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G21280.1 |
52.4 |
30.5 |
53.3 |
| Symbols: | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7447690-7448403 REVERSE LENGTH=237 |
| Medicago |
Medtr1262s0010.1 |
134 |
53.0 |
68.2 |
| hypothetical protein | HC | scaffold1262:34-1511 | 20130731 |
| Soybean |
Glyma01g29320.1 |
223 |
70.7 |
73.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0891300.1 |
length: 157 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14244 |
UBN2_3 |
8.9e-07 |
2-51 |
- Wolf-PSORT
Lj4g3v0891300.1 mito 8, nucl 3, chlo 1, cyto 1, plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0891300.1 |
|