Miyakogusa Predicted Gene

Lj4g3v0816700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KP92_SOYBN 718 67.7 77.3 (tr|K7KP92) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G67250.1 520 51.1 65.9 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein 2 | chr5:26831677-26833260 REVERSE LENGTH=527
Medicago Medtr4g094932.1 696 65.8 75.0 | F-box protein SKIP2 | HC | chr4:39315059-39312725 | 20130731
Soybean Glyma05g20970.1 716 67.5 77.2  
LJGI gnl|LJGI|TC68497 2006 100.0 100.0 similar to UniRef100_Q9FE83 Cluster: F-box protein SKIP2; n=1; Arabidopsis thaliana|Rep: F-box protein SKIP2 - Arabidopsis thaliana (Mouse-ear cress), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0816700.1 length: 530 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 1.4e+02 126-151
283-308
309-336
337-361
362-387
388-412
413-438
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.6e-06 35-70
Gene3D G3DSA:3.80.10.10 no description 4.6e-28 88-187
251-442
HMMPanther PTHR23125 F-BOX/LEUCINE 1.5e-187 34-524
HMMPanther PTHR23125:SF44 SKIP-2, 1.5e-187 34-524
HMMPfam PF12937 F-box-like 1.4e-06 38-70
Seg seg seg NA 209-220
416-427
485-493
superfamily SSF52047 RNI-like 3.4e-35 49-443
Wolf-PSORT
Lj4g3v0816700.1	chlo 9, cyto 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0816700.1 Not targeted -37.329 -0.012 -2.645 47.12% -34.672