Miyakogusa Predicted Gene

Lj4g3v0770770.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S5W2_LOTJA 241 79.6 79.6 (tr|I3S5W2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G67390.2 74.7 71.4 85.7 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr5:26887883-26888512 REVERSE LENGTH=176

Medicago Medtr4g095440.2 229 64.7 69.1 | hypothetical protein | HC | chr4:39784896-39782341 | 20130731

Soybean Glyma05g22210.2 228 61.9 65.6

LJGI gnl|LJGI|TC68330 1005 100.0 100.0 similar to UniRef100_A7PLN3 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v0770770.1 length: 193 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 97-109
125-142

Wolf-PSORT

Lj4g3v0770770.1 nucl 7.5, cyto_nucl 5, plas 2, cyto 1.5, chlo 1, extr 1, pero 1, golg_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v0770770.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S5W2_LOTJA	241	79.6	79.6	(tr\|I3S5W2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G67390.2	74.7	71.4	85.7	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). \| chr5:26887883-26888512 REVERSE LENGTH=176
Medicago	Medtr4g095440.2	229	64.7	69.1	\| hypothetical protein \| HC \| chr4:39784896-39782341 \| 20130731
Soybean	Glyma05g22210.2	228	61.9	65.6
LJGI	gnl\|LJGI\|TC68330	1005	100.0	100.0	similar to UniRef100_A7PLN3 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)

no_ID
Lj4g3v0770770.1				length: 193 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	97-109 125-142