Miyakogusa Predicted Gene
- Lj4g3v0756960.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MLY0_SOYBN |
378 |
69.6 |
79.3 |
(tr|K7MLY0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G67540.2 |
300 |
59.2 |
72.5 |
| Symbols: | Arabinanase/levansucrase/invertase | chr5:26944253-26945757 REVERSE LENGTH=471 |
| Medicago |
Medtr5g015460.1 |
335 |
63.1 |
75.3 |
| glycosyl hydrolase family 43 protein | HC | chr5:5348835-5354586 | 20130731 |
| Soybean |
Glyma17g17390.1 |
364 |
70.3 |
80.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0756960.1 |
length: 270 aa. |
| IPR006710 |
Glycoside hydrolase, family 43 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR22925 |
GLYCOSYL |
2.2e-53 |
108-270 |
| IPR023296 |
Glycosyl hydrolase, five-bladed beta-propellor domain |
| Gene3D |
G3DSA:2.115.10.20 |
no description |
1.7e-07 |
153-270 |
| superfamily |
SSF75005 |
Arabinanase/levansucrase/invertase |
2.5e-16 |
144-270 |
| no_ID |
|
| HMMPanther |
PTHR22925:SF3 |
BETA-GLUCANASE |
2.2e-53 |
108-270 |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
6.000 |
1-32 |
| Seg |
seg |
seg |
NA |
30-38 |
- Wolf-PSORT
Lj4g3v0756960.1 chlo 6, pero 4, chlo_mito 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0756960.1 |
|