| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1KBJ8_SOYBN | 786 | 83.4 | 89.4 | (tr|I1KBJ8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G33440.1 | 635 | 66.7 | 81.1 | | Symbols: | Pectin lyase-like superfamily protein | chr4:16092020-16094732 FORWARD LENGTH=475 |
| Medicago | Medtr3g096330.1 | 767 | 80.7 | 88.7 | | glycoside hydrolase family 28 protein | HC | chr3:44026955-44022720 | 20130731 |
| Soybean | Glyma06g15940.1 | 786 | 83.4 | 89.4 | |
| LJGI | gnl|LJGI|FS321740 | 1120 | 100.0 | 100.0 | similar to UniRef100_A7QB41 Cluster: Chromosome chr4 scaffold_73, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_73, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%) |
| Lj4g3v0709670.1 | length: 481 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 3.7e-39 | 176-455 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 26 | 246-272 273-305 307-329 335-356 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 7.3e-97 | 59-468 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 5e-109 | 75-457 |
| no_ID | ||||
| HMMPanther | PTHR31339 | FAMILY | 9.9e-180 | 32-477 |
| HMMPanther | PTHR31339:SF0 | SUBFAMILY | 9.9e-180 | 32-477 |
| Seg | seg | seg | NA | 23-32 |
Lj4g3v0709670.1 cyto 12, mito 1, E.R. 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v0709670.1 |