Miyakogusa Predicted Gene

Lj4g3v0708640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1K2G8_SOYBN 758 64.3 69.6 (tr|I1K2G8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G37750.1 392 83.4 87.9 | Symbols: ANT, DRG, CKC, CKC1 | Integrase-type DNA-binding superfamily protein | chr4:17739782-17742189 FORWARD LENGTH=555
Medicago Medtr4g097520.1 679 58.6 64.8 | AP2-like ethylene-responsive transcription factor | HC | chr4:40188319-40192060 | 20130731
Soybean Glyma05g22970.1 733 63.8 69.3  
LJGI gnl|LJGI|TC76753 819 100.0 100.0 similar to UniRef100_A7R1V2 Cluster: Chromosome chr7 scaffold_382, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_382, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0708640.1 length: 636 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 2.3e-06 301-312
442-462
Gene3D G3DSA:3.30.730.10 no description 1.1e-17 300-367
402-460
HMMPfam PF00847 AP2 2.4e-12 299-358
403-452
HMMSmart SM00380 DNA-binding 2.4e-33 300-372
402-466
ProfileScan PS51032 AP2_ERF 19.190 300-366
402-460
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 7.8e-20 401-463
299-369
no_ID  
HMMPanther PTHR32467 FAMILY 1.9e-175 95-616
HMMPanther PTHR32467:SF0 SUBFAMILY 1.9e-175 95-616
Seg seg seg NA 5-18
32-53
159-179
240-261
437-442
567-583
597-613
Wolf-PSORT
Lj4g3v0708640.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0708640.1