Miyakogusa Predicted Gene

Lj4g3v0684090.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JGC3_MEDTR 602 82.8 90.1 (tr|G7JGC3) ATP synthase subunit beta OS=Medicago truncatula GN=MTR_4g082610 PE=4 SV=1

TAIR_pep AT1G26650.1 416 64.3 79.7 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9210335-9211342 FORWARD LENGTH=335

Medicago Medtr4g082350.1 607 83.0 90.2 | transmembrane protein, putative | HC | chr4:32077565-32075769 | 20130731

Soybean Glyma07g35440.1 585 81.6 87.7

LJGI gnl|LJGI|BP028360 297 100.0 100.0 similar to UniRef100_A7QSN9 Cluster: Chromosome undetermined scaffold_161, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_161, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v0684090.1 length: 356 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 210-221

Wolf-PSORT

Lj4g3v0684090.1 plas 6.5, cyto_plas 4, E.R. 3, vacu 2, golg 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v0684090.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JGC3_MEDTR	602	82.8	90.1	(tr\|G7JGC3) ATP synthase subunit beta OS=Medicago truncatula GN=MTR_4g082610 PE=4 SV=1
TAIR_pep	AT1G26650.1	416	64.3	79.7	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:9210335-9211342 FORWARD LENGTH=335
Medicago	Medtr4g082350.1	607	83.0	90.2	\| transmembrane protein, putative \| HC \| chr4:32077565-32075769 \| 20130731
Soybean	Glyma07g35440.1	585	81.6	87.7
LJGI	gnl\|LJGI\|BP028360	297	100.0	100.0	similar to UniRef100_A7QSN9 Cluster: Chromosome undetermined scaffold_161, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_161, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)

no_ID
Lj4g3v0684090.1				length: 356 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	210-221