Miyakogusa Predicted Gene

Lj4g3v0683990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JGB1_MEDTR 993 74.6 83.3 (tr|G7JGB1) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_4g082470 PE=4 SV=1
TAIR_pep AT2G03380.1 707 52.9 69.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:1028292-1030361 FORWARD LENGTH=689
Medicago Medtr4g082470.1 993 74.6 83.4 | PPR containing plant-like protein | HC | chr4:32162319-32165367 | 20130731
Soybean Glyma07g35270.1 861 72.6 81.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0683990.1 length: 692 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.013 163-191
192-219
265-289
297-319
473-498
574-597
HMMPfam PF13041 PPR_2 1.8e-09 395-444
498-546
HMMTigr TIGR00756 PPR: 0.002 265-290
398-430
501-535
536-570
574-598
ProfileScan PS51375 PPR 6.226 159-193
125-155
260-294
225-259
295-329
396-430
365-395
499-533
468-498
432-466
534-569
570-600
635-670
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1e-07 629-653
no_ID  
HMMPanther PTHR24015 FAMILY 3.4e-267 34-685
HMMPanther PTHR24015:SF51 UNKNOWN 3.4e-267 34-685
Seg seg seg NA 331-348
Wolf-PSORT
Lj4g3v0683990.1	chlo 10, nucl 1, cyto 1, mito 1, extr 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0683990.1