Miyakogusa Predicted Gene
- Lj4g3v0669720.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JHJ3_MEDTR |
1046 |
80.5 |
86.2 |
(tr|G7JHJ3) Asparagine synthetase domain-containing protein OS=Medicago truncatula GN=MTR_4g083180 PE=4 SV=1 |
| TAIR_pep |
AT2G03667.1 |
723 |
59.6 |
70.9 |
| Symbols: | Asparagine synthase family protein | chr2:1114179-1117281 FORWARD LENGTH=610 |
| Medicago |
Medtr4g083180.1 |
1046 |
80.5 |
86.2 |
| asparagine synthase | HC | chr4:32369694-32378820 | 20130731 |
| Soybean |
Glyma20g03040.1 |
1014 |
77.8 |
83.6 |
|
| LJGI |
gnl|LJGI|FS339366 |
1392 |
99.9 |
99.9 |
similar to UniRef100_A7P2E6 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0669720.1 |
length: 643 aa. |
| IPR000583 |
Class II glutamine amidotransferase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF13537 |
GATase_7 |
2.8e-08 |
106-215 |
| IPR001962 |
Asparagine synthase |
| Molecular Function |
GO:0004066 |
asparagine synthase (glutamine-hydrolyzing) activity |
|
|
| Biological Process |
GO:0006529 |
asparagine biosynthetic process |
|
|
| HMMPfam |
PF00733 |
Asn_synthase |
9.3e-47 |
327-602 |
| IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
| Gene3D |
G3DSA:3.40.50.620 |
no description |
1.2e-77 |
321-630 |
| no_ID |
|
| Gene3D |
G3DSA:3.60.20.10 |
no description |
3.7e-10 |
31-221 |
| HMMPanther |
PTHR11772 |
ASPARAGINE |
4.2e-125 |
2-629 |
| Seg |
seg |
seg |
NA |
214-226 |
| superfamily |
SSF52402 |
Adenine |
4.6e-29 |
353-614 |
| superfamily |
SSF56235 |
N-terminal |
3.8e-11 |
1-248 |
- Wolf-PSORT
Lj4g3v0669720.1 chlo 6, nucl 2, plas 2, nucl_plas 2, cyto 1, vacu 1, E.R. 1, cysk 1, golg_plas 1, E.R._vacu 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0669720.1 |
|