Miyakogusa Predicted Gene

Lj4g3v0668230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KMB2_SOYBN 1930 82.7 88.5 (tr|I1KMB2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G08470.1 1155 55.2 69.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731 FORWARD LENGTH=1130
Medicago Medtr4g083460.1 1651 73.4 80.3 | peroxisome biogenesis factor 1 | HC | chr4:32473994-32487544 | 20130731
Soybean Glyma07g35030.1 1930 82.7 88.5  
LJGI gnl|LJGI|FS335831 1011 100.0 100.0 similar to UniRef100_A7QCT5 Cluster: Chromosome undetermined scaffold_79, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_79, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0668230.1 length: 1135 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.4e-14 591-743
878-1014
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.3e-38 595-740
882-1009
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 982-1000
IPR009010 Aspartate decarboxylase-like domain
superfamily SSF50692 ADC-like 9.2e-07 10-97
IPR015342 Peroxisome biogenesis factor 1, N-terminal
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005777 peroxisome    
Biological Process GO:0007031 peroxisome organization    
HMMPfam PF09262 PEX-1N 6.2e-23 102-177
IPR025653 Peroxisome biogenesis factor 1
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005778 peroxisomal membrane    
Biological Process GO:0006625 protein targeting to peroxisome    
Molecular Function GO:0042623 ATPase activity, coupled    
HMMPanther PTHR23077:SF12 PEROXISOME 5e-296 13-1135
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.3e-35 839-1114
545-825
no_ID  
Gene3D G3DSA:1.10.8.60 no description 3.1e-15 749-824
1024-1099
Gene3D G3DSA:3.10.330.10 no description 2.5e-26 99-178
Gene3D G3DSA:3.40.50.300 no description 7.1e-54 586-748
843-1023
HMMPanther PTHR23077 AAA-FAMILY 5e-296 13-1135
Seg seg seg NA 61-70
401-417
716-730
1050-1063
superfamily SSF54585 Cdc48 3.1e-23 98-177
Wolf-PSORT
Lj4g3v0668230.1	cyto 4, chlo 3, nucl 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0668230.1