Miyakogusa Predicted Gene

Lj4g3v0668080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0X2_SOYBN 1192 70.3 81.2 (tr|K7N0X2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G18520.1 652 55.3 76.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10215250-10217103 REVERSE LENGTH=617
Medicago Medtr4g083630.1 978 78.3 86.5 | PPR containing plant-like protein | HC | chr4:32536076-32533157 | 20130731
Soybean Glyma20g02830.1 1111 74.9 86.4  
LJGI gnl|LJGI|AV769479 513 97.6 97.6 weakly similar to UniRef100_A7NV40 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0668080.1 length: 825 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 7.2e-06 328-354
356-386
428-454
456-486
529-552
558-586
631-654
731-757
759-789
HMMPfam PF13041 PPR_2 1.9e-12 656-704
HMMTigr TIGR00756 PPR: 9.5e-06 356-389
428-456
456-490
558-590
658-691
731-759
759-793
ProfileScan PS51375 PPR 8.561 354-388
323-353
454-488
423-453
555-589
524-554
656-690
625-655
757-791
726-756
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.9e-05 622-650
no_ID  
HMMPanther PTHR24015 FAMILY 2.3e-196 322-817
HMMPanther PTHR24015:SF106PENTATRICOPEPTIDE (PPR) 2.3e-196 322-817
Seg seg seg NA 75-101
163-176
Wolf-PSORT
Lj4g3v0668080.1	chlo 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0668080.1