Miyakogusa Predicted Gene
- Lj4g3v0655900.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SY34_LOTJA |
327 |
91.4 |
91.4 |
(tr|I3SY34) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G45040.1 |
201 |
57.9 |
71.3 |
| Symbols: | Cytochrome c | chr5:18175566-18176851 REVERSE LENGTH=175 |
| Medicago |
Medtr4g083990.2 |
238 |
67.8 |
77.4 |
| cytochrome protein C | HC | chr4:32684983-32688502 | 20130731 |
| Soybean |
Glyma07g34740.1 |
243 |
69.1 |
78.9 |
|
| LJGI |
gnl|LJGI|TC65617 |
1031 |
99.6 |
99.6 |
similar to UniRef100_A2Q293 Cluster: Cytochrome c, monohaem; n=1; Medicago truncatula|Rep: Cytochrome c, monohaem - Medicago truncatula (Barrel medic), partial (82%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0655900.1 |
length: 175 aa. |
| IPR009056 |
Cytochrome c domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| Molecular Function |
GO:0020037 |
heme binding |
|
|
| ProfileScan |
PS51007 |
CYTC |
11.219 |
71-163 |
| superfamily |
SSF46626 |
Cytochrome |
7.5e-16 |
43-171 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.760.10 |
no description |
1.2e-21 |
72-170 |
| HMMPfam |
PF13442 |
Cytochrome_CBB3 |
4.6e-09 |
72-136 |
| Seg |
seg |
seg |
NA |
45-59 |
- Wolf-PSORT
Lj4g3v0655900.1 chlo 4, plas 3, chlo_mito 3, nucl 2, cyto 2, mito 2, cyto_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0655900.1 |
|