Miyakogusa Predicted Gene

Lj4g3v0654660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP25_LOTJA 627 85.4 88.1 (tr|C0JP25) Putative basic helix-loop-helix protein BHLH14 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT2G31210.1 195 36.4 49.5 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:13296655-13298139 FORWARD LENGTH=428
Medicago Medtr4g094762.1 465 68.8 75.5 | basic helix loop helix (BHLH) DNA-binding family protein | HC | chr4:38924047-38922213 | 20130731
Soybean Glyma05g26490.1 510 72.4 77.3  
LJGI gnl|LJGI|GO011534 1176 94.9 94.9 similar to UniRef100_A7QN80 Cluster: Chromosome undetermined scaffold_131, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_131, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0654660.1 length: 383 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 3.7e-09 215-275
HMMPfam PF00010 HLH 2.5e-09 215-257
HMMSmart SM00353 helix 5.9e-10 214-263
ProfileScan PS50888 BHLH 14.049 208-257
superfamily SSF47459 HLH, 3.3e-14 206-290
no_ID  
Coil coil coiled-coil NA 254-275
HMMPanther PTHR11514 MYC 3.2e-23 214-374
HMMPanther PTHR11514:SF8 EGL3 3.2e-23 214-374
Seg seg seg NA 5-12
269-282
317-328
Wolf-PSORT
Lj4g3v0654660.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0654660.1