Miyakogusa Predicted Gene
- Lj4g3v0654410.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7ZGK5_LOTJA |
2810 |
98.5 |
98.5 |
(tr|B7ZGK5) Nck-associated protein 1 OS=Lotus japonicus GN=nap PE=2 SV=1 |
| TAIR_pep |
AT2G35110.2 |
2234 |
76.5 |
86.3 |
| Symbols: GRL, NAP1, NAPP | transcription activators | chr2:14795970-14803525 REVERSE LENGTH=1396 |
| Medicago |
Medtr4g084140.1 |
2635 |
92.1 |
95.6 |
| Nck-associated-like protein | HC | chr4:32779971-32796530 | 20130731 |
| Soybean |
Glyma20g02370.1 |
1935 |
91.0 |
95.2 |
|
| LJGI |
gnl|LJGI|TC76528 |
1982 |
99.8 |
99.8 |
similar to UniRef100_A7P2R3 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0654410.1 |
length: 1383 aa. |
| IPR019137 |
Nck-associated protein 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09735 |
Nckap1 |
0.0 |
116-1268 |
| no_ID |
|
| HMMPanther |
PTHR12093 |
PTHR12093 |
0.0 |
60-1280 |
| HMMPanther |
PTHR12093:SF1 |
PTHR12093:SF1 |
0.0 |
60-1280 |
- Wolf-PSORT
Lj4g3v0654410.1 nucl 6, mito 4, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0654410.1 |
|