Miyakogusa Predicted Gene

Lj4g3v0654120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LEJ4_SOYBN 639 58.4 73.8 (tr|K7LEJ4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G62590.1 347 37.8 61.6 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:23177294-23179198 REVERSE LENGTH=634
Medicago Medtr0308s0020.1 665 61.0 76.2 | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731
Soybean Glyma09g30530.1 629 59.9 75.7  
LJGI gnl|LJGI|FS333759 418 87.8 87.8 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0654120.1 length: 502 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 1.7e-06 357-390
462-494
HMMPfam PF13041 PPR_2 1.3e-18 81-130
151-199
221-269
293-340
396-445
HMMTigr TIGR00756 PPR: 5.8e-13 84-117
119-144
154-188
189-223
224-257
259-293
294-327
329-358
364-398
399-430
435-468
ProfileScan PS51375 PPR 9.339 82-116
47-81
117-151
152-186
187-221
222-256
257-291
292-326
327-361
362-396
397-431
432-466
467-501
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.8e-05 186-423
no_ID  
HMMPanther PTHR24015 FAMILY 7.6e-160 62-499
HMMPanther PTHR24015:SF0 SUBFAMILY 7.6e-160 62-499
superfamily SSF48452 TPR-like 0.011 397-496
Wolf-PSORT
Lj4g3v0654120.1	chlo 7.5, chlo_mito 6.83333, mito 5, cyto_mito 3.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0654120.1