Miyakogusa Predicted Gene

Lj4g3v0630990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LD40_SOYBN 107 56.0 74.7 (tr|K7LD40) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G08780.1 80.5 56.5 74.2 | Symbols: | winged-helix DNA-binding transcription factor family protein | chr5:2856782-2858810 FORWARD LENGTH=457
Medicago Medtr4g084700.1 126 52.8 77.8 | linker histone H1 and h5 family protein | HC | chr4:33010895-33015140 | 20130731
Soybean Glyma17g23750.1 82.0 45.4 66.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0630990.1 length: 433 aa.
IPR005818 Histone H1/H5
method AccNumber shortName E-value location
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
HMMPfam PF00538 Linker_histone 5.3e-10 70-133
HMMSmart SM00526 Domain 8.8e-11 68-134
ProfileScan PS51504 H15 20.915 70-140
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 8.5e-12 68-135
no_ID  
Seg seg seg NA 5-21
133-168
203-216
246-259
283-308
326-345
superfamily SSF46785 "Winged 9.1e-13 66-155
Wolf-PSORT
Lj4g3v0630990.1	nucl 11, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0630990.1