Miyakogusa Predicted Gene

Lj4g3v0620070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JE03_SOYBN 656 80.2 88.9 (tr|I1JE03) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G19380.1 514 62.4 76.3 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-6715867 REVERSE LENGTH=421
Medicago Medtr4g085720.1 623 78.7 87.8 | plant U-box protein | HC | chr4:33514484-33512769 | 20130731
Soybean Glyma02g11480.1 656 80.2 88.9  
LJGI gnl|LJGI|TC77091 1398 100.0 100.0 similar to UniRef100_A7P9L6 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0620070.1 length: 414 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2e-21 14-85
HMMSmart SM00504 Modified 1.3e-33 17-80
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2.7e-24 70-389
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.3e-30 13-69
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.2e-18 103-389
no_ID  
HMMPanther PTHR22849 WDSAM1 3.1e-67 5-405
Seg seg seg NA 377-390
superfamily SSF57850 RING/U-box 1.3e-27 9-93
Wolf-PSORT
Lj4g3v0620070.1	chlo 5, cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0620070.1