Miyakogusa Predicted Gene
- Lj4g3v0575450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JEW1_SOYBN |
669 |
91.0 |
96.5 |
(tr|I1JEW1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G15730.1 |
533 |
72.4 |
83.4 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:6849797-6851881 FORWARD LENGTH=344 |
| Medicago |
Medtr4g086580.1 |
647 |
87.8 |
94.2 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr4:33929099-33934605 | 20130731 |
| Soybean |
Glyma02g15180.1 |
669 |
91.0 |
96.5 |
|
| LJGI |
gnl|LJGI|TC62516 |
1501 |
100.0 |
100.0 |
similar to UniRef100_A7P9G2 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0575450.1 |
length: 344 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
1.5e-18 |
93-302 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
5.2e-07 |
89-315 |
| HMMPanther |
PTHR32175 |
FAMILY |
1.5e-191 |
1-344 |
| HMMPanther |
PTHR32175:SF0 |
SUBFAMILY |
1.5e-191 |
1-344 |
- Wolf-PSORT
Lj4g3v0575450.1 cyto 9, E.R. 2, chlo 1, nucl 1, mito 1, chlo_mito 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0575450.1 |
|