Miyakogusa Predicted Gene

Lj4g3v0575400.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KLY0_SOYBN 559 84.7 88.5 (tr|I1KLY0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G19130.1 433 72.0 83.2 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B | chr3:6611398-6613823 REVERSE LENGTH=435
Medicago Medtr4g086600.1 528 79.6 84.5 | polyadenylate-binding protein RBP47B | HC | chr4:33938062-33942519 | 20130731
Soybean Glyma07g33300.1 559 84.7 88.5  
LJGI gnl|LJGI|TC63380 884 100.0 100.0 similar to UniRef100_A7P9G1 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0575400.2 length: 321 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.2e-17 3-59
86-156
206-269
HMMSmart SM00360 RNA 7.5e-21 1-66
85-159
205-272
ProfileScan PS50102 RRM 18.086 84-163
1-70
204-276
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 9.5e-24 2-69
76-167
185-288
no_ID  
HMMPanther PTHR24012 FAMILY 2.3e-156 1-311
HMMPanther PTHR24012:SF55 SUBFAMILY 2.3e-156 1-311
Seg seg seg NA 169-177
288-302
superfamily SSF54928 RNA-binding 1.5e-14 82-283
1-68
Wolf-PSORT
Lj4g3v0575400.2	nucl 8, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0575400.2