Miyakogusa Predicted Gene

Lj4g3v0575060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S6A8_LOTJA 283 100.0 100.0 (tr|I3S6A8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G49590.1 170 59.3 77.0 | Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr1:18354997-18356409 FORWARD LENGTH=242
Medicago Medtr4g086640.1 238 85.7 91.0 | nucleic acid-binding protein | HC | chr4:33958713-33953836 | 20130731
Soybean Glyma10g13810.1 249 87.1 92.4  
LJGI gnl|LJGI|TC69466 785 100.0 100.0 similar to UniRef100_Q69Y13 Cluster: Formin-binding protein-related-like; n=1; Oryza sativa Japonica Group|Rep: Formin-binding protein-related-like - Oryza sativa subsp. japonica (Rice), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0575060.1 length: 132 aa.
IPR000690 Zinc finger, C2H2-type matrin
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50171 ZF_MATRIN 9.691 11-42
IPR003604 Zinc finger, U1-type
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 U1-like 2.5e-06 8-43
IPR013085 Zinc finger, U1-C type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF06220 zf-U1 2e-08 11-43
no_ID  
Coil coil coiled-coil NA 37-72
HMMPanther PTHR13173 WW 1.2e-37 2-132
superfamily SSF57667 C2H2 4.5e-14 8-67
Wolf-PSORT
Lj4g3v0575060.1	mito 9, nucl 2, chlo 1, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0575060.1