Miyakogusa Predicted Gene

Lj4g3v0523550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L2Y1_SOYBN 671 78.4 85.0 (tr|K7L2Y1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G52050.1 535 68.6 83.0 | Symbols: | 5'-3' exonuclease family protein | chr3:19305228-19309398 FORWARD LENGTH=425
Medicago Medtr4g087250.1 652 78.2 84.6 | DNA polymerase I-like protein | HC | chr4:34214391-34203894 | 20130731
Soybean Glyma07g33020.1 446 87.0 92.5  
LJGI gnl|LJGI|BW610948 858 100.0 100.0 similar to UniRef100_A7QAR5 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0523550.1 length: 430 aa.
IPR002421 5'-3' exonuclease, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0008409 5'-3' exonuclease activity    
HMMSmart SM00475 5'-3' 2.1e-100 100-388
IPR008918 Helix-hairpin-helix motif, class 2
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003824 catalytic activity    
HMMSmart SM00279 Helix-hairpin-helix 4.4e-13 296-331
IPR020045 5'-3' exonuclease, C-terminal domain
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF01367 5_3_exonuc 2.5e-26 294-389
superfamily SSF47807 5' 1.7e-26 293-375
IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0008409 5'-3' exonuclease activity    
HMMPfam PF02739 5_3_exonuc_N 1.9e-29 101-172
179-291
no_ID  
Gene3D G3DSA:1.10.150.20 no description 4e-27 297-370
Gene3D G3DSA:3.40.50.1010 no description 4.1e-49 95-292
HMMPanther PTHR10133 DNA 5.8e-93 95-393
HMMPanther PTHR10133:SF20 DNA 5.8e-93 95-393
Seg seg seg NA 7-18
superfamily SSF88723 PIN 3.9e-33 99-282
Wolf-PSORT
Lj4g3v0523550.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0523550.1